Archive for the 'Scholarly Communication' Category

SPARC Author Rights Forum Established

Posted in Author Rights, Open Access, Publishing, Scholarly Communication, Self-Archiving on February 5th, 2008

The Scholarly Publishing and Academic Resources Coalition has established a new mailing list: the SPARC Author Rights Forum.

Here's an excerpt from the press release:

SPARC (the Scholarly Publishing and Academic Resources Coalition) has introduced a new discussion forum on the topic of author rights. The SPARC Author Rights Forum provides a private and moderated venue for academic librarians to explore copyright and related issues in teaching and research—especially questions arising from the development of digital repositories and recent public access mandates.

The SPARC Author Rights Forum has been established to support educational outreach to authors on issues related to retaining their copy rights. Topics relevant to the list include, but are not limited to:

  • Ensuring copyright compliance with public access policies, including the new National Institutes of Health mandate
  • Rights of faculty under copyright and contract law
  • Availability and use of author addenda
  • Working with publishers to secure agreements to retain needed rights
  • Experiences in developing institutional copyright policies and educational programs

The list will focus primarily on the U.S. and Canadian legal environments, though members of the international community are welcome to join. Educators, researchers, policy makers, librarians, legal counsel, and all who have an interest in responsible author copyright management are encouraged to contribute. The SPARC Author Rights Forum is moderated by Kevin Smith, J.D., Scholarly Communications Officer for Duke University Libraries.

List membership is subject to approval and posts are moderated for appropriate topical content. To request membership in the SPARC Author Rights Forum, send any message to sparc-arforum-feed@arl.org.

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Scholarship in the Age of Abundance: Enhancing Historical Research with Text-Mining and Analysis Tools Project

Posted in Digital Humanities, Scholarly Communication on February 5th, 2008

The Center for History and New Media's Scholarship in the Age of Abundance: Enhancing Historical Research with Text-Mining and Analysis Tools project has been awarded a two-year grant from the National Endowment for the Humanities.

Here's an excerpt from "Enhancing Historical Research with Text-Mining and Analysis Tools":

We will first conduct a survey of historians to examine closely their use of digital resources and prospect for particularly helpful uses of digital technology. We will then explore three main areas where text mining might help in the research process: locating documents of interest in the sea of texts online; extracting and synthesizing information from these texts; and analyzing large-scale patterns across these texts. A focus group of historians will be used to assess the efficacy of different methods of text mining and analysis in real-world research situations in order to offer recommendations, and even some tools, for the most promising approaches.

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A Dialog with the Mellon Foundation's Don Waters on the Grand Text Auto Open Peer Review Experiment

Posted in Scholarly Books, Scholarly Communication, Web 2.0/Social Networking on February 4th, 2008

Previously ("Book to Be Published by MIT Press Undergoing Blog-Based Open Peer Review"), DigitalKoans reported on an open-peer-review experiment on the Grand Text Auto Weblog.

Now, if:book has published a dialog between its staff, the book's author, and Donald J. Waters, the Andrew W. Mellon Foundation's Program Officer for scholarly communications, about the experiment.

Here's an excerpt from the posting:

[Waters] As I understand the explanations, there is a sense in which the experiment is not aimed at "peer review" at all in the sense that peer review assesses the qualities of a work to help the publisher determine whether or not to publish it. What the exposure of the work-in-progress to the community does, besides the extremely useful community-building activity, is provide a mechanism for a function that is now all but lost in scholarly publishing, namely "developmental editing." It is a side benefit of current peer review practice that an author gets some feedback on the work that might improve it, but what really helps an author is close, careful reading by friends who offer substantive criticism and editorial comments. . . . The software that facilitates annotation and the use of the network, as demonstrated in this experiment, promise to extend this informal practice to authors more generally.

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DISC-UK Report on Web 2.0 Data Visualization Tools

Posted in Big Data, Data Curation, Open Data, and Research Data Management, Scholarly Communication, Web 2.0/Social Networking on February 3rd, 2008

JISC has released DISC-UK DataShare: Web 2.0 Data Visualisation Tools: Part 1—Numeric Data.

Here's an excerpt from the "Introduction":

Part 1 of this briefing paper will highlight some examples of new collaborative web services using Web 2.0 technologies which venture into the numeric data visualisation arena. These mashups allow researchers to upload and analyse their own data in ‘open’ and dynamic environments. Broadly speaking the numeric data being referred to could be micro-data (data about the individual), macro-data2 or country-level data, derived or summary data.

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Research Blogging: Identifying, Indexing, and Presenting Posts about Peer-Reviewed Literature

Posted in Scholarly Communication, Web 2.0/Social Networking on February 1st, 2008

Research Blogging is a new service that identifies, indexes, and presents new Weblog posts about peer-reviewed literature.

Here's an excerpt from its About page:

  • Bloggers—often experts in their field—find exciting new peer-reviewed research they'd like to share. They write thoughtful posts about the research for their blogs.
  • Bloggers register with us and use a simple one-line form to create a snippet of code to place in their posts. This snippet not only notifies our site about their post, it also creates a properly formatted research citation for their blog.
  • Our software automatically scans registered blogs for posts containing our code snippet. When it finds them, it indexes them and displays them on our front page—thousands of posts from hundreds of blogs, in one convenient place, organized by topic.
  • The quality of the posts listed on our site is monitored by the member bloggers. If a post doesn't follow our guidelines, it is removed from our database. Borderline cases may be discussed in our forums.
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Are There 200,000 "Duplicate" Articles in Journals Indexed by Medline?

Posted in Open Access, Publishing, Scholarly Communication, Scholarly Journals on January 24th, 2008

Based on a recent study published in Nature, it is possible that there may be as many as 200,000 duplicate articles (either articles that were published in multiple journals or plagiarized) in journals indexed by Medline. To conduct the study, Mounir Errami and Harold Garner utilized the eTBLAST software to analyze samples of Medline article abstracts in order to estimate the prevalence of duplicate articles.

Duplicate detection is an issue of great concern to both publishers and scholars. The CrossCheck project is allowing eight publishers to test the duplicate checking as part of the editorial process in a closed-access environment. In the project's home page, it states:

Currently, existing PD [plagiarism detection] systems do not index the majority of scholarly/professional content because it is inaccessible to crawlers directed at the open web. The only scholarly literature that is currently indexed by PD systems is that which is available openly (e.g. OA, Archived or illegitimately posted copies) or that which has been made available via third-party aggregators (e.g. ProQuest). This, in turn, means that any publisher who is interested in employing PD systems in their editorial work-flow is unable to do so effectively. Even if a particular publisher doesn't have a problem with plagiarized manuscripts, they should have an interest in making sure that their own published content is not plagiarized or otherwise illegitimately copied.

In order for CrossRef members to use existing PD systems, there needs to be a mechanism through which PD system vendors can, under acceptable terms & conditions, create and use databases of relevant scholarly and professional content.

Open access advocates have pointed out that one advantage of OA is that it allows the unrestricted analysis and manipulation of the full text of freely available works. Open access makes it possible for all interested parties, including scholars and others who might not have access to closed duplicate verification databases, to conduct whatever analysis as they wish and to make the results public without having to consider potential business impacts.

Read more about it at: "Copycat Articles Seem Rife in Science Journals, a Digital Sleuth Finds" and "How Many Papers Are Just Duplicates?"

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International Study of Peer Review

Posted in Publishing, Scholarly Communication, Scholarly Journals on January 23rd, 2008

The Publishing Research Consortium has released "Peer Review in Scholarly Journals: Perspective of the Scholarly Community—An International Study."

Here's an excerpt from the "Executive Summary":

The survey thus paints a picture of academics committed to peer review, with the vast majority believing that it helps scientific communication and in particular that it improves the quality of published papers. They are willing to play their part in carrying out review, though it is worrying that the most productive reviewers appear to be overloaded. Many of them are in fact willing to go further than at present and take on responsibility for reviewing authors’ data. Within this picture of overall satisfaction there are, however, some sizeable pockets of discontent. This discontent does not always translate into support for alternative methods of peer review; in fact some of those most positive about the benefits of peer review were also the most supportive of post-publication review. Overall, there was substantial minority support for post-publication review as a supplement to formal peer review, but much less support for open review as an alternative to blinded review.

Read more about it at "Peer Review Study."

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Book to Be Published by MIT Press Undergoing Blog-Based Open Peer Review

Posted in Publishing, Scholarly Books, Scholarly Communication, University Presses on January 22nd, 2008

Noah Wardrip-Fruin's draft of Expressive Processing: Digital Fictions, Computer Games, and Software Studies, which will be published by MIT Press, is undergoing an open peer-review process on the Grand Text Auto Weblog using a new plug-in version of CommentPress. The book is also undergoing a conventional peer-review process.

Read more about it at "Blog Comments and Peer Review Go Head to Head to See Which Makes a Book Better"and "Expressive Processing: An Experiment in Blog-Based Peer Review."

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Humanities Cyberinfrastructure: The TextGrid Project

Posted in Cyberinfrastructure/E-Science, Digital Humanities, Grid Computing, Scholarly Communication on January 21st, 2008

The Humanities-oriented TextGrid Project is part of the larger German D-Grid initiative.

Here's an excerpt from the About TextGrid page:

TextGrid aims to create a community grid for the collaborative editing, annotation, analysis and publication of specialist texts. It thus forms a cornerstone in the emerging e-Humanities. . . .

Despite modern information technology and a clear thrust towards collaboration, text scientists still mostly work in local systems and project-oriented applications. Current initiatives lack integration with already existing text corpora, and they remain unconnected to resources such as dictionaries, lexica, secondary literature and tools. . . .

Integrated tools that satisfy the specific requirements of text sciences could transform the way scholars process, analyse, annotate, edit and publish text data. Working towards this vision, TextGrid aims at building a virtual workbench based on e-Science methods.

The installation of a grid-enabled architecture is obvious for two reasons. On the one hand, past and current initiatives for digitising and accessioning texts already accrued a considerable data volume, which exceeds multiple terabytes. Grids are capable of handling these data volumes. Also the dispersal of the community as well as the scattering of resources and tools call for establishing a Community Grid. This establishes a platform for connecting the experts and integrating the initiatives worldwide. The TextGrid community is equipped with a set of powerful software tools based on existing solutions and embracing the grid paradigm.

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ResearcherID.com and NISO Institutional Identifier

Posted in Metadata, Scholarly Communication on January 21st, 2008

As scholarly digital information has proliferated in many formats and versions on the Internet, it has become increasing difficult to identify works that are by the same author or by the same institution. Recently, Thomson Scientific has begun work on author and institution identifiers.

Here's an excerpt from "Thomson Scientific Tagging Researchers: ResearcherID.com."

Thomson Scientific (http://scientific.thomson.com) has opened up a new web service called ResearcherID.com (www.researcherid.com) that allows researchers to establish their own identities and, with some restrictions, to identify their writings. . . .

Currently, all the registrants must have authorized access to Thomson Scientific's Web of Knowledge. In addition, all the registrants on the site are there by invitation only, but Pringle expects the service will be open to all Web of Knowledge users by the end of the month. Since Thomson estimates the access to that service to be 20 million users worldwide, this restriction would still make the service broad-based, if researchers choose to use it.

Here's an excerpt from "But What About Corporate Authors? NISO Institutional Identifier Project Underway."

Thomson Scientific (http://scientific.thomson.com) has joined an effort with the National Information Standards Organization (NISO; www.niso.org) to build an open standard for identifying institutions. The initial NISO effort will focus on academic and research institutions, the kind often referred to in author affiliation or corporate author fields. . . .

The charge from the voting membership to the new working group is to study and propose an identifier that will uniquely identify institutions and describe relationships between entities within institutions. In the course of developing a proposed identifier, the group will consider the minimum set of data consistent with account privacy and security issues, as well as other data used to support different business models.

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Digital Video on JoVE (Journal of Visualized Experiments)

Posted in Digital Media, E-Journals, Publishing, Scholarly Communication, Scholarly Journals on January 20th, 2008

In a digital video from the Google Tech Talks series, Moshe Pritsker, Editor-in-Chief of JoVE (Journal of Visualized Experiments), discusses that video-based journal.

Here's an excerpt from the abstract:

Contrasting the rapid advancement of scientific research itself, scientific communication still heavily relies on traditional print journals. Print journals however, lack the necessary characteristics to allow enable an effective transfer of knowledge, which is significantly impeding scientific progress. Addressing this problem, the Journal of Visualized Experiments (JoVE, www.jove.com) implemented a novel, video-based approach to scientific publishing, based on visualization of experimental studies. Created with the participation of scientists from leading research institutions (e.g. Harvard, MIT, and Princeton), JoVE provides solutions to the "bottleneck" of the contemporary biological research: transparency and reproducibility of biological experiments. JoVE has so far released 9 monthly issues that include over 150 video-protocols on experimental approaches in developmental biology, neuroscience, microbiology and other fields.

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Mellon Foundation Awards Four Grants for Cooperative University Press Projects

Posted in Publishing, Scholarly Books, Scholarly Communication, University Presses on January 20th, 2008

The Andrew W. Mellon Foundation has awarded grants to four groups of university presses to support the cooperative publication of scholarly books and digital works in the fields of American Literatures, Ethnomusicology, Slavic Studies, and South Asian Studies. The Ethnomusicology project will develop a plan for publishing printed and digital works, and the American Literatures project will utilize a "a shared, centralized, external editorial service dedicated solely to managing the production of books in the initiative."

Here's an excerpt from the press release:

The four projects and participating presses are:

  • Slavic Studies: University of Wisconsin Press, Northwestern University Press, and the University of Pittsburgh Press;
  • American Literatures: New York University Press, Fordham University Press, Rutgers University Press, Temple University Press, and the University of Virginia Press;
  • South Asian Studies: Columbia University Press, the University of California Press, and the University of Chicago Press;
  • Ethnomusicology: Indiana University Press, Kent State University Press, and Temple University Press. . . .

Wisconsin, Northwestern, and Pittsburgh will use the Mellon funds to support the publication and promotion of first monographs in Russian, East European, and Central Asian studies. Although all three presses have strong publication lists in this field, this initiative will enable them to accept more first books by junior scholars, to work closely with those scholars to develop their authorial skills, and in some cases to underwrite the publication of works in paperback or the incorporation of expensive elements (such as color images). . . .

The American Literatures Initiative, led by NYU in collaboration with Fordham, Rutgers, Temple and Virginia, also seeks to publish promising scholars’ first books in their focus field of English-language literatures of Central and North America and the Caribbean. The most innovative aspect of the program will be the establishment of a shared, centralized, external editorial service dedicated solely to managing the production of books in the initiative. This service will handle all copyediting, design, layout, and typesetting costs, and manage each title through to the point where it is ready for printing. Mellon funds will also be used to pay authors modest royalty advances and develop robust, collaborative marketing efforts among the five presses—which will reduce costs for advertising and electronic marketing, publicity, academic conference exhibits, and other efforts. . . .

Major editorial goals of the Columbia-led South Asian Studies series will be to open up new archival material to scholars, to explore new theories and methods, and to develop scholarship that is both deep in expertise and broad in appeal across disciplines. . . .

The ethnomusicology project received a one-year planning grant, the first phase in establishing a cooperative publishing program that will include the digital publication of related field materials. Through their cooperative series Indiana, Kent State, and Temple will seek to broaden publishing opportunities for emerging scholars in ethnomusicology, and to offer scholars in ethnomusicology and related fields enhanced means of accessing these materials via the Web. In so doing the presses’ goal is to assist in disseminating scholarship and developing new methodologies in both research and publication. The project will be eligible to apply for continued funding at the completion of the planning stage.

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