Category: Open Access

ARL Publishes NIH Public Access Policy Guide

The Association of Research Libraries has published "The NIH Public Access Policy: Guide for Research Universities."

Here's an excerpt from the press release:

The new NIH Public Access Policy, which becomes effective April 7, 2008, calls for mandatory deposit in PubMed Central of peer-reviewed electronic manuscripts stemming from NIH funding. The change from a voluntary to mandatory policy creates new expectations, not just of funded investigators, but also of the grantee institutions that support those investigators.

The ARL guide, "The NIH Public Access Policy: Guide for Research Universities," includes the following sections:

  • Policy Overview
  • Institutional Responses
  • Retaining Rights
  • How to Deposit
  • Resources

The guide focuses on the implications of the NIH policy for institutions as grantees, although some information for individual investigators is included and links to further details are provided. The guide is helpful to a range of campus constituencies that may be involved in implementing the new policy, including research administrators, legal counsel, and librarians.

In addition to compliance concerns, the guide also considers the benefits of the new policy and institutions' opportunities to build on the policy requirements by seeking additional rights for using funded research to address local needs.

Reflecting the dynamic nature of campus implementation activities, the guide will be updated as more campuses release plans, resources, and tools that can serve as models for their peers.

Presentations from the Open Access Collections Workshop

Presentations from the Open Access Collections workshop are now available.

Here are selected presentations:

VALA 2008 Presentations

Presentations from the VALA 2008 conference are now available.

Here's a selection of presentations:

Michelle McLean has blogged a number of VALA 2008 sessions in Connecting Librarian postings.

A Review and Analysis of Academic Publishing Agreements and Open Access Policies

The OAK (Open Access to Knowledge) Law Project has published A Review and Analysis of Academic Publishing Agreements and Open Access Policies.

Here's an excerpt from the "Conclusion and Next Steps":

The review of publishers’ open access policies and practices found that:

  • the majority of publishers did not have a formal open access policy;
  • only four of the total sample of 64 publishers surveyed had a formal open access policy;
  • 62.5% of the publishers were able to provide sufficient information to enable them to be “colour classified” using the SHERPA/RoMEO colour classification system to denote levels of open access;
  • using the SHERPA/RoMEO colour classifications:
    • 25% of the surveyed publishers were “green” (permitting archiving of the pre-print and post-print versions of published articles);
    • 4.7% were “blue” (permitting archiving of the post-print version);
    • 6.25% were “yellow” (permitting archiving of the pre-print version);
    • 26.6% were “white” (archiving not formally supported).

SPARC Author Rights Forum Established

The Scholarly Publishing and Academic Resources Coalition has established a new mailing list: the SPARC Author Rights Forum.

Here's an excerpt from the press release:

SPARC (the Scholarly Publishing and Academic Resources Coalition) has introduced a new discussion forum on the topic of author rights. The SPARC Author Rights Forum provides a private and moderated venue for academic librarians to explore copyright and related issues in teaching and research—especially questions arising from the development of digital repositories and recent public access mandates.

The SPARC Author Rights Forum has been established to support educational outreach to authors on issues related to retaining their copy rights. Topics relevant to the list include, but are not limited to:

  • Ensuring copyright compliance with public access policies, including the new National Institutes of Health mandate
  • Rights of faculty under copyright and contract law
  • Availability and use of author addenda
  • Working with publishers to secure agreements to retain needed rights
  • Experiences in developing institutional copyright policies and educational programs

The list will focus primarily on the U.S. and Canadian legal environments, though members of the international community are welcome to join. Educators, researchers, policy makers, librarians, legal counsel, and all who have an interest in responsible author copyright management are encouraged to contribute. The SPARC Author Rights Forum is moderated by Kevin Smith, J.D., Scholarly Communications Officer for Duke University Libraries.

List membership is subject to approval and posts are moderated for appropriate topical content. To request membership in the SPARC Author Rights Forum, send any message to sparc-arforum-feed@arl.org.

E-Print Preservation: SHERPA DP: Final Report of the SHERPA DP Project

JISC has released SHERPA DP: Final Report of the SHERPA DP Project.

Here's an excerpt from the "Executive Summary":

The SHERPA DP project (2005–2007) investigated the preservation of digital resources stored by institutional repositories participating in the SHERPA project. An emphasis was placed on the preservation of e-prints—research papers stored in an electronic format, with some support for other types of content, such as electronic theses and dissertations.

The project began with an investigation of the method that institutional repositories, as Content Providers, may interact with Service Providers. The resulting model, framed around the OAIS, established a Co-operating archive relationship, in which data and metadata is transferred into a preservation repository subsequent to it being made available. . . .

The Arts & Humanities Data Service produced a demonstrator of a Preservation Service, to investigate the operation of the preservation service and accepted responsibility for the preservation of the digital objects for a three-year period (two years of project funding, plus one year).

The most notable development of the Preservation Service demonstrator was the creation of a reusable service framework that allows the integration of a disparate collection of software tools and standards. The project adopted Fedora as the basis for the preservation repository and built a technical infrastructure necessary to harvest metadata, transfer data, and perform relevant preservation activities. Appropriate software tools and standards were selected, including JHOVE and DROID as software tools to validate data objects; METS as a packaging standard; and PREMIS as a basis on which to create preservation metadata. . . .

A number of requirements were identified that were essential for establishing a disaggregated service for preservation, most notably some method of interoperating with partner institutions and he establishment of appropriate preservation policies. . . . In its role as a Preservation Service, the AHDS developed a repository-independent framework to support the EPrints and DSpace-based repositories, using OAI-PMH as common method of connecting to partner institutions and extracting digital objects.

Columbia University and Microsoft Book Digitization Project

The Columbia University Libraries have announced that they will work with Microsoft to digitize a "large number of books" that are in the public domain.

Here's an excerpt from the press release:

Columbia University and Microsoft Corp. are collaborating on an initiative to digitize a large number of books from Columbia University Libraries and make them available to Internet users. With the support of the Open Content Alliance (OCA), publicly available print materials in Columbia Libraries will be scanned, digitized, and indexed to make them readily accessible through Live Search Books. . . .

Columbia University Libraries is playing a key role in book selection and in setting quality standards for the digitized materials. Microsoft will digitize selected portions of the Libraries’ great collections of American history, literature, and humanities works, with the specific areas to be decided mutually by Microsoft and Columbia during the early phase of the project.

Microsoft will give the Library high-quality digital images of all the materials, allowing the Library to provide worldwide access through its own digital library and to share the content with non-commercial academic initiatives and non-profit organizations.

Read more about it at "Columbia University Joins Microsoft Scan Plan."

How to Harvest OAI-PMH Records with the Freeware MarcEdit Program

Terry Reese has posted step-by-step instructions about how to harvest OAI-PMH records from the University of Michigan Libraries' MBooks digital books collection using her MarcEdit freeware program. The data can either be converted to the MARC format or stored as is. MarcEdit also has a Z39.50 client as well as crosswalks, such as MARC to Dublin Core and MARC to EAD.

REPOMAN-L (Institutional Repository Managers' Mailing List) Launched

Richard Griscom, University of Pennsylvania, and Leah Vanderjagt, University of Alberta, have launched REPOMAN-L (Institutional Repository Managers' Mailing List).

Here's an excerpt from the announcement:

We have created REPOMAN-L (Institutional Repository Managers' Mailing List) as an open forum for the discussion of issues, great and small, that confront repository managers. We hope that you will subscribe and participate enthusiastically, and use this list for problem-solving and sharing of advice; for example:

  • to poll the group on practices at their institutions
  • to ask about any aspect of development from policy to outreach
  • initiatives to software evaluation
  • to share links to useful tools and references
  • to explore rationale around decisions you're making about your repository. . . .

The list is purposefully unaffiliated with any institution, initiative, repository software platform, or conceptual idea such as open access; the list would of course not exclude discussion of these areas, but we ask subscribers to consider initiating these discussions on lists set up specifically for the topics and then bring summaries of relevance to this list.

Are There 200,000 "Duplicate" Articles in Journals Indexed by Medline?

Based on a recent study published in Nature, it is possible that there may be as many as 200,000 duplicate articles (either articles that were published in multiple journals or plagiarized) in journals indexed by Medline. To conduct the study, Mounir Errami and Harold Garner utilized the eTBLAST software to analyze samples of Medline article abstracts in order to estimate the prevalence of duplicate articles.

Duplicate detection is an issue of great concern to both publishers and scholars. The CrossCheck project is allowing eight publishers to test the duplicate checking as part of the editorial process in a closed-access environment. In the project's home page, it states:

Currently, existing PD [plagiarism detection] systems do not index the majority of scholarly/professional content because it is inaccessible to crawlers directed at the open web. The only scholarly literature that is currently indexed by PD systems is that which is available openly (e.g. OA, Archived or illegitimately posted copies) or that which has been made available via third-party aggregators (e.g. ProQuest). This, in turn, means that any publisher who is interested in employing PD systems in their editorial work-flow is unable to do so effectively. Even if a particular publisher doesn't have a problem with plagiarized manuscripts, they should have an interest in making sure that their own published content is not plagiarized or otherwise illegitimately copied.

In order for CrossRef members to use existing PD systems, there needs to be a mechanism through which PD system vendors can, under acceptable terms & conditions, create and use databases of relevant scholarly and professional content.

Open access advocates have pointed out that one advantage of OA is that it allows the unrestricted analysis and manipulation of the full text of freely available works. Open access makes it possible for all interested parties, including scholars and others who might not have access to closed duplicate verification databases, to conduct whatever analysis as they wish and to make the results public without having to consider potential business impacts.

Read more about it at: "Copycat Articles Seem Rife in Science Journals, a Digital Sleuth Finds" and "How Many Papers Are Just Duplicates?"

New Mailing Lists: JISC-SHIBBOLETH-LIBRARIES and Sword-app-tech

Two mailing lists have been recently established: JISC-SHIBBOLETH-LIBRARIES and sword-app-tech.

Excerpt from the JISC-SHIBBOLETH announcement:

Many institutions are now at the stage with their implementation of federated access management where issues directly impacting libraries are being considered and managed. This includes discovery processes for end-users, testing and changing access to federated service providers, dealing with different user definitions, managing license and resource information and changing send-user information.

To help support this process we have established a separate mailing list to enable discussion and exchange of views directly relating to library issues.

Excerpt from the Fedora-commons-users announcement:

A new mailing list has been created for discussion, bug reports, implementations questions and development ideas relating to SWORD (Simple Web-service Offering Repository Deposit).

SWORD is a protocol for interoperable deposit between repository platforms. It was developed by a JISC project during 2007, building on earlier work to define a deposit protocol, and is based on the Atom Publishing Protocol.

NIH Public Access Policy Implementation

On an updated Web page and a FAQ, the National Institutes of Health (NIH) has explained its implementation of the Public Access Policy required by Division G, Title II, Section 218 of PL 110-161 (Consolidated Appropriations Act, 2008).

Here's an excerpt from the NIH Public Access Policy Web page:

How to Comply

Address Copyright

Make sure that any copyright transfer or other publication agreements allow the article to be submitted to NIH in accordance with the Policy.

Submit Article

Authors may submit an article to the journal of their choice for publication.

  1. If you choose to publish your article in certain journals, you need do nothing further to comply with the submission requirement of the Policy. See http://publicaccess.nih.gov/submit_process_journals.htm for a list of these journals.
  2. For any journal other than one of those in this list, the author must:

    a. Inform the journal that the article is subject to the Public Access Policy when submitting it for publication.

    b. Make sure that any copyright transfer or other publication agreement allows the article to be submitted to NIH in accordance with the Policy. For more information, see the FAQ Whose approval do I need to submit my article to PubMed Central? and consult with your Institution.

    c. Submit the article to NIH, upon acceptance for publication. See the Submission Process for more information.

Cite Article

When citing their NIH-funded articles in NIH applications, proposals or progress reports, authors must include the PubMed Central reference number for each article.

Important Dates

  • April 7, 2008 As of April 7, 2008, all articles arising from NIH funds must be submitted to PubMed Central upon acceptance for publication.
  • May 25, 2008 As of May 25, 2008, NIH applications, proposals, and progress reports must include the PubMed Central reference number when citing an article that falls under the policy and is authored or co-authored by the investigator, or arose from the investigator’s NIH award. This policy includes applications submitted to the NIH for the May 25, 2008 due date and subsequent due dates.

Peter Suber has made some helpful comments about the policy implementation in "New FAQ for New NIH Policy" and "Text of the NIH OA Policy."

PublicDomainReprints.org Turns Digital Public Domain Books into Printed Books

PublicDomainReprints.org is offering an experimental service that allows users to convert about 1.7 million digital public domain books in the Internet Archive, Google Book Search, or the Universal Digital Library into printed books using the Lulu print-on-demand service.

Source: "Converting Google Book PDFs to Actual Books."

Institutional Repositories, Tout de Suite

Institutional Repositories, Tout de Suite, the latest Digital Scholarship publication, is designed to give the reader a very quick introduction to key aspects of institutional repositories and to foster further exploration of this topic through liberal use of relevant references to online documents and links to pertinent websites. It is under a Creative Commons Attribution-Noncommercial 3.0 United States License, and it can be freely used for any noncommercial purpose in accordance with the license.

NIH Open Access Mandate Becomes Law

President Bush has signed the "Consolidated Appropriations Act, 2008," which includes the NIH open access mandate. The mandate states: "The Director of the National Institutes of Health shall require that all investigators funded by the NIH submit or have submitted for them to the National Library of Medicine's PubMed Central an electronic version of their final, peer-reviewed manuscripts upon acceptance for publication, to be made publicly available no later than 12 months after the official date of publication: Provided, That the NIH shall implement the public access policy in a manner consistent with copyright law."

Read more about it at "OA Mandate at NIH Now Law and "Public Access Mandate Made Law."

Columbia University Libraries and Bavarian State Library Become Google Book Search Library Partners

Both the Columbia University Libraries and Bavarian State Library have joined the Google Book Search Library Project.

Here are the announcements:

Biomedical Digital Libraries and BioMed Central Part Company

According to "Biomedical Digital Libraries Moves to Open Journal Systems," Biomedical Digital Libraries will no longer be published by BioMed Central because "BMC's author payment model had become untenable for most of the authors wishing to publish in the journal." In the future, the journal will be published using Public Knowledge Project's Open Journal Systems without author fees.

BioMed Central has an article-processing charges waiver policy with case-by-case basis review, and it also offers a variety of article-processing charges discounts. It is not clear why these cost-reduction mechanisms did not meet author needs.

Alpha Release of the ORE Specification and User Guide

The Open Archives Initiative Object Reuse and Exchange has released an alpha version of the ORE Specification and User Guide. Comments can be made on the OAI-ORE discussion group or via email to ore@openarchives.org.

Here's an excerpt from the introduction:

The World Wide Web is built upon the notion of atomic units of information called resources that are identified with URIs such as http://www.openarchives.org/ore/0.1/toc (this page). In addition to these atomic units, aggregations of resources are often units of information in their own right. . . .

A mechanism to associate identities with these aggregations and describe them in a machine-readable manner would make them visible to Web agents, both humans and machines. This could be useful for a number of applications and contexts. For example:

  • Crawler-based search engines could use such descriptions to index information and provide search results sets at the granularity of the aggregations rather than their individual parts.
  • Browsers could leverage them to provide users with navigation aids for the aggregated resources, in the same manner that machine-readable site maps provide navigation clues for crawlers.
  • Other automated agents such as preservation systems could use these descriptions as guides to understand a "whole document" and determine the best preservation strategy.
  • Systems that mine and analyze networked information for citation analysis/bibliometrics could achieve better accuracy with knowledge of aggregation structure contained in these descriptions.
  • These machine-readable descriptions could provide the foundation for advanced scholarly communication systems that allow the flexible reuse and refactoring of rich scholarly artifacts and their components [Value Chains].

University of Michigan Libraries Make over 100,000 Records for Digitized Books Available for Harvesting

The University of Michigan Libraries have made over 100,000 metadata records from its MBooks collection available for OAI-PMH harvesting. The records are for digitized books in the public domain.

Here's an excerpt from the announcement:

The University of Michigan Library is pleased to announce that records from our MBooks collection are available for OAI harvesting. The MBooks collection consists of materials digitized by Google in partnership with the University of Michigan.

http://quod.lib.umich.edu/cgi/o/oai/oai?verb=Identify

Only records for MBooks available in the public domain are exposed. We have split these into sets containing public domain items according to U.S. copyright law, and public domain items worldwide. There are currently over 100,000 records available for harvesting. We anticipate having 1 million records available when the entire U-M collection has been digitized by Google.

University of Michigan Libraries Release the UMich OAI Toolkit

The University of Michigan Libraries have released the UMich OAI Toolkit.

Here's an excerpt from the announcement:

This toolkit contains both harvester and data provider, both written in Perl. . . .

UMHarvester is a robust tool using LWP for harvesting nigh on every OAI data provider available. It allows for incremental harvesting, has multiple re-try options, and a batch harvest tool (Batch_UMHarvest) that can automatically perform incremental harvesting.

UMProvider relies heavily on libxml (XML::LibXML) and will store the data in nearly any relational database. It functions by harvesting from a database of records, making rights determinations from a separate database, and providing the resulting set of records.

Originally, only the UMHarvester was available from UM's DLXS software site. The UMProvider tool is newly developed and takes the place of our DLXS data provider tool.

Rice University Releases Travelers in the Middle East Archive

Rice University has released the Travelers in the Middle East Archive under a Creative Commons Attribution 2.5 Generic License.

Here's an excerpt from the announcement:

IMEA provides access to:

  • Nearly 1,000 images, including stereocards, postcards and book illustrations
  • More than 150 historical maps representing the Middle East as it was in the 19th and early 20th centuries
  • Interactive geographical information systems (GIS) maps that serve as an interface to the collection and present detailed information about features such as waterways, elevation and populated places
  • Successive editions of classic travel guides and major museum collection catalogues
  • Convenient educational modules that set materials from the collection in historical and geographic context and explore the research process

TIMEA is able to offer seamless access for researchers by providing a common user interface to digital objects housed in three repositories. Texts, historical maps and images reside in DSpace, an open-source digital repository system. Educational research modules are presented within Connexions, an open-content commons and publishing platform for educational materials. TIMEA also uses Google Maps and ESRI’s ArcIMS map server.

New Release of BioMed Central's Open Repository, a Hosted Institutional Repository Service

BioMed Central has released version 1.4.9 of Open Repository, its DSpace-based, hosted institutional repository service.

Here's an excerpt from the press release:

Open Repository version 1.4.9 has several new features that are designed to enhance the customer experience. The release offers an improved user interface, making it easier for customers to browse and submit their material online. Additionally, institutions can convert their Word, Excel, PowerPoint, Text and RTF documents to PDF format. Customers can also set up RSS feeds, and customize lists and search fields, adding value to the already robust platform.

Pitt's Libraries and University Press Establish Open Access Book Program

The University of Pittsburgh University Library System and the University of Pittsburgh University Press have established the University of Pittsburgh University Press Digital Editions, which offers free access to digitized versions of print books from the press.

Here's an excerpt from the press release:

The University of Pittsburgh’s University Library System (ULS) and University Press have formed a partnership to provide digital editions of press titles as part of the library system’s D-Scribe Digital Publishing Program. Thirty-nine books from the Pitt Latin American Series published by the University of Pittsburgh Press are now available online, freely accessible to scholars and students worldwide. Ultimately, most of the Press’ titles older than 2 years will be provided through this open access platform.

For the past decade, the University Library System has been building digital collections on the Web under its D-Scribe Digital Publishing Program, making available a wide array of historical documents, images and texts which can be browsed by collection and are fully searchable. The addition of the University of Pittsburgh Press Digital Editions collection marks the newest in an expanding number of digital collaborations between the University Library System and the University Press.

The D-Scribe Digital Publishing Program includes digitized materials drawn from Pitt collections and those of other libraries and cultural institutions in the region, pre-print repositories in several disciplines, the University’s mandatory electronic theses and dissertations program, and electronic journals during the past eight years, sixty separate collections have been digitized and made freely accessible via the World Wide Web. Many of these projects have been carried out with content partners such as Pitt faculty members, other libraries and museums in the area, professional associations, and most recently, with the University of Pittsburgh Press with several professional journals and the new University of Pittsburgh Press Digital Editions. . . .

More titles will be added to the University of Pittsburgh Press Digital Editions each month until most of the current scholarly books published by the Press are available both in print and as digital editions. The collection will eventually include titles from the Pitt Series in Russian and East European Studies, the Pitt-Konstanz Series in the Philosophy and History of Science, the Pittsburgh Series in Composition, Literacy, and Culture, the Security Continuum: Global Politics in the Modern Age, the History of the Urban Environment, back issues of Cuban Studies, and numerous other scholarly titles in history, political science, philosophy, and cultural studies.