Category: Open Access

"A Landscape of Open Science Policies Research"


This literature review aims to examine the approach given to open science policy in the different studies. The main findings are that the approach given to open science has different aspects: policy framing and its geopolitical aspects are described as an asymmetries replication and epistemic governance tool. The main geopolitical aspects of open science policies described in the literature are the relations between international, regional, and national policies. There are also different components of open science covered in the literature: open data seems much discussed in the works in the English language, while open access is the main component discussed in the Portuguese and Spanish speaking papers. Finally, the relationship between open science policies and the science policy is framed by highlighting the innovation and transparency that open science can bring into it.

https://doi.org/10.1177/21582440221140358

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"Free and Open-Source Automated Open Access Preprint Harvesting"


Universities are attempting to ensure that all of their research is publicly accessible because of funding mandates. Many universities have established campus open access (OA) repositories but are struggling with how to upload millions of manuscripts under numerous license agreements while also linking metadata to make them discoverable. To do this manually requires around 15 minutes per manuscript from an experienced librarian. The time and cost to do this campus-wide is prohibitive. To radically reduce the time and costs of this process and to harvest all past work, this article reports on the development and testing of a free and open source (FOSS) JavaScript-based application, aperta-accessum, which does the following: 1) harvests names and emails from a department’s faculty webpage; 2) identifies scholars’ Open Researcher and Contributor Identifiers (ORCID iDs); 3) obtains digital object identifiers (DOIs) of publications for each scholar; 4) checks for existing copies in an institution’s OA repository; 5) identifies the legal opportunities to provide OA versions of all of the articles not already in the OA repository; 6) sends authors emails requesting a simple upload of author manuscripts; and 7) adds link-harvested metadata from DOIs with uploaded preprints into a bepress repository; the code can be modified for additional repositories. The results of this study show that, in the administrative time needed to make a single document OA manually, aperta-accessum can process approximately five entire departments worth of peer-reviewed articles. Following best practices discussed, it is clear that this open-source OA harvester enables institutional library’s stewardship of OA knowledge on a mass scale for radically reduced costs.

https://doi.org/10.31274/jlsc.14421

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

Federating Research Infrastructures in Europe for Fair Access to Data: Science Europe Briefing on EOSC

The European research and innovation ecosystem is going through a period of profound change. Researchers, organisations that fund or perform research, and policymakers are reshaping the research process and its outputs based on the opportunities offered by the digital transition. The findability, accessibility, interoperability, and reusability (FAIRness) of research publications, data, and software in the digital space will define research and innovation going forward. Closely related, the transition to an open research process and Open Access of its outputs is becoming the ‘new normal’. One of the most prominent initiatives in the digital and open transition of research is the European Open Science Cloud (EOSC). This federation of existing research data infrastructures in Europe aims to create a web of FAIR data and related services for research.

https://doi.org/10.5281/zenodo.7346887

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"The Impact of Open and Reproducible Scholarship on Students’ Scientific Literacy, Engagement, and Attitudes Towards Science: A Review and Synthesis of the Evidence"


Currently, the impact of integrating an open and reproducible approach into the curriculum on student outcomes is not well articulated in the literature. Therefore, in this paper, we provide the first comprehensive review of how integrating open and reproducible scholarship into teaching and learning may impact students, using a large-scale, collaborative, team-science approach. Our review highlighted how embedding open and reproducible scholarship may impact: (1) students’ scientific literacies (i.e., students’ understanding of open research, consumption of science, and the development of transferable skills); (2) student engagement (i.e., motivation and engagement with learning, collaboration, and engagement in open research), and (3) students’ attitudes towards science (i.e., trust in science and confidence in research findings). Our review also identified a need for more robust and rigorous methods within evaluations of teaching practice. We discuss implications for teaching and learning scholarship in this area.

https://doi.org/10.31222/osf.io/9e526

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"Texas Universities Reach Historic Deal with Elsevier: TLCUA Saves Texas Universities Millions Collectively"


All TLCUA members will receive a discount on journal subscriptions—some as high as 30%—while still maintaining significant amounts of access to journals and combined, will realize a savings of over $4.75M annually. Beyond initial cost savings, Elsevier agreed to a maximum annual increase of 2% over the course of the license agreement, with some years as low as 0%, which is significantly lower than industry standard. . . . TLCUA and Elsevier have agreed to partner on a pilot project to revert ownership of journal articles back to original authors—and not just those at TLCUA-member institutions. Currently, authors transfer copyright of their work in exchange for that work being published. This pilot will provide for rights to go back to authors after a period of time that will be collaboratively determined with Elsevier. . . . Further, all TLCUA-member authors who choose to publish their work under an open access license will have access to discounted author publication charges (APCs). TLCUA also negotiated a license template that removed non-disclosure terms, restrictions on sharing usage data, and 44-year-old limitations on interlibrary loans (i.e., CONTU Guidelines) to expand library collaboration and improve how libraries can share information on journal usage.

https://cutt.ly/G1Yu8IU

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"Accountability in the Knowledge Commons: Lessons from Next Generation Library Publishing and the 2022 Values and Principles Summit"


Values and principles provide a scaffold for community governance of the knowledge commons, engaging stakeholders in the construction of a system that encourages participants to adhere to a shared set of ethical and functional practices. This article introduces the FOREST Framework for Values-Driven Scholarly Communication, a toolkit and approach developed by the Next Generation Library Publishing project to assess a community or organization’s alignment with scholarly values and principles. The article situates the FOREST Framework within the context of other initiatives advancing values-based scholarly communication and explains the importance of assessment mechanisms as a core element in governing an equitable and sustainable knowledge commons. It also synthesizes the findings of a half-day summit hosted in February 2022 that convened representatives of values-and-principles-based frameworks and initiatives in scholarly communication to strategize a collective future for these efforts.

http://doi.org/10.1629/uksg.588

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

India: "Ministry [of Education] Sets ‘One Nation, One Subscription ’ Deal Deadline"


"One Nation, One Subscription" (ONOS) is a scheme of the Office of the Principal Scientific Adviser to the Government of India. The letter from the ministry’s Department of Higher Education said the government will negotiate with journal publishers for "all people in India" to have access to journal articles under a single centrally negotiated payment to be made by the government.

https://cutt.ly/A1bnyQK

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"Open Science Infrastructure as a Key Component of Open Science"


The Open Science movement is a response to the accumulated problems in scholarly communication, like the "reproducibility crisis", "serials crisis", and "peer review crisis". The European Commission defines priorities of Open Science as Findable, Accessible, Interoperable and Reproducible (FAIR) data, infrastructure and services in the European Open Science Cloud (EOSC), Next generation metrics, altmetrics and rewards, the future of scientific communication, research integrity and reproducibility, education and skills and citizen science. Open Science Infrastructure is also one of four key components of Open Science defined by UNESCO.

Mainly represented among Open Science Infrastructures are institutional and thematic repositories for publications, research data, software and code. Furthermore, the Open Science Infrastructure services range may include discovery, mining, publishing, the peer review process, archiving and preservation, social networking tools, training, high-performance computing, and tools for processing and analysis. Successful Open Science Infrastructure should be based on community values and responsive to needed changes. Preferably the Open Science Infrastructure should be distributed, enabling machine-actionable tools and services, supporting reusability and reproducibility, quality FAIR data, interoperability, sustainability, long-term preservation and funding.

https://doi.org/10.7557/5.6777

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"Why Don’t We Share Data and Code? Perceived Barriers and Benefits to Public Archiving Practices"


Here, we define, categorize and discuss barriers to data and code sharing that are relevant to many research fields. We explore how real and perceived barriers might be overcome or reframed in the light of the benefits relative to costs. By elucidating these barriers and the contexts in which they arise, we can take steps to mitigate them and align our actions with the goals of open science, both as individual scientists and as a scientific community.

https://doi.org/10.1098/rspb.2022.1113

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"Reducing Barriers to Open Science by Standardizing Practices and Realigning Incentives"


In this policy position paper, we outline current open science practices and key bottlenecks in their broader adoption. We propose that national science agencies create a digital infrastructure framework that would standardize open science principles and make them actionable. We also suggest ways of redefining research success to align better with open science, and to incentivize a system where sharing various research outputs is beneficial to researchers.

https://doi.org/10.38126/JSPG210201

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"Recommendations for Transformative Journal Agreements with Providers of Publishing Services Published"


These formulated criteria will serve as a common, action-guiding framework for actors from all science organizations—that is, higher education institutions as well as non-university research institutions—for negotiations with providers of publishing services. . . .The criteria are organized into the following aspects: journal transformation, pricing; transparency, workflow, preprints, metadata and interfaces, statistics, tracking, and waivers.

https://cutt.ly/z1zjc9H

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"Data Quality Assurance at Research Data Repositories"


This paper presents findings from a survey on the status quo of data quality assurance practices at research data repositories.

The personalised online survey was conducted among repositories indexed in re3data in 2021. It covered the scope of the repository, types of data quality assessment, quality criteria, responsibilities, details of the review process, and data quality information and yielded 332 complete responses.

The results demonstrate that most repositories perform data quality assurance measures, and overall, research data repositories significantly contribute to data quality. Quality assurance at research data repositories is multifaceted and nonlinear, and although there are some common patterns, individual approaches to ensuring data quality are diverse. The survey showed that data quality assurance sets high expectations for repositories and requires a lot of resources. Several challenges were discovered: for example, the adequate recognition of the contribution of data reviewers and repositories, the path dependence of data review on review processes for text publications, and the lack of data quality information. The study could not confirm that the certification status of a repository is a clear indicator of whether a repository conducts in-depth quality assurance.

http://doi.org/10.5334/dsj-2022-018

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

Paywall: "A Comprehensive Review of Open Data Platforms, Prevalent Technologies, and Functionalities"


We will discuss seven major open data platforms, such as (1) CKAN (2) DKAN (3) Socrata (4) OpenDataSoft (5) GitHub (6) Google datasets (7) Kaggle. We will evaluate the technological commons, techniques, features, methods, and visualization offered by each tool. In addition, why are these platforms important to users such as providers, curators, and end-users? And what are the key options available on these platforms to publish open data?

https://doi.org/10.1145/3560107.3560142

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"Producing Open Data"


Mainly building on our own experience as scholars from different research traditions (life sciences, social sciences and humanities), we describe best-practice approaches for opening up research data. We reflect on common barriers and strategies to overcome them, condensed into a step-by-step guide focused on actionable advice in order to mitigate the costs and promote the benefit of open data on three levels at once: society, the disciplines and individual researchers.

https://doi.org/10.3897/rio.8.e86384

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

University of Washington: "Elsevier Negotiation Update 11/2/2022"


At $2.6M per year and an annual 2.5% increase, the Elsevier journal package is the most expensive annual expenditure for the University of Washington (UW) Libraries. For context, the total UW Libraries collections budget for the Seattle campus is approximately $16 million, and we spend about $13 million on ongoing subscriptions. Immediate access to 2,500 Elsevier journal titles published in the current year represent about 15% of the Libraries annual collections budget. . . .The Elsevier journal package reinforces the scholarly publishing model based on paywalls and rationing of access, inequitable opportunities for publishing, and excessive pricing and annual price increases that undermines a scholarly ecosystem where the open sharing of knowledge is critical to accelerating change for the public good. . . .As a result, the Libraries will be unable to maintain immediate access for all titles in our current list of 2,500 Elsevier journal titles on ScienceDirect. There is no choice but to begin identifying which journals need to be available for immediate access to meet patient care needs as well as long term use for research, teaching, and learning. The Libraries will continue to provide faculty, students and staff access to published articles through alternative access options such as PubMed Central, Google Scholar, and interlibrary loan — most requested articles are delivered within a few hours or business days.

https://cutt.ly/bMZQwIf

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"eLife Reviewed Preprints: Interview with Fiona Hutton"


How is the new publishing model similar to or different from older publishing models based on preprints combined with peer review (e.g. Copernicus, F1000)? There are three main differences. 1) Peer review and assessment at eLife continues to be organised by an editorial team made up of academic experts and led by an Editor-in-Chief, Deputy Editors, Senior Editors, and a Board of Reviewing Editors via a consultative peer-review model already known as one of the most constructive for authors in the industry. 2) The addition of an eLife assessment is a further crucial part of our model, distinctive from what others are doing—it is a key addition to our public peer reviews and it enables readers to understand the context of the work, the significance of the research and the strength of the evidence. 3) We are no longer making accept/reject decisions based on peer review—authors will choose if and when to produce a Version of Record at any point following the review process.

https://cutt.ly/gMPfonI

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"Guest Post – Charleston 2022 – Finding Paths to Open Access Book Publishing"


So just to summarize, there are two facts that are often overlooked when we discuss how university presses generally recover the costs of publishing their frontlist of new titles and how they might finance open access for monographs:

  1. A very large portion of a university press’s sales are not to academic libraries. Libraries are key to a university press’s overall success, and our model doesn’t work without them, but our model also depends on other revenue sources;
  2. Most of a university press’s annual revenues derive not from sales of new books, but from sales of previously published titles collectively known as the "backlist," which are generally those titles that were published more than twelve months ago. The sales of these titles may adversely be impacted by the availability of open access formats as readers transition to digital.

https://cutt.ly/gMPfZB7

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"Nature Authors Can Now Seamlessly Share Their Data"


In April of this year, Springer Nature and Figshare announced a new integrated route for data deposition at Nature Portfolio titles to help address this problem and encourage researchers to share data rather than seeing it as a hurdle to article publication.

Following the success of the pilot, this streamlined integration is now being extended. Authors submitting to the Nature Portfolio journals, including Nature, in the fields of life, health, chemical and physical sciences will now be able to easily opt into data sharing, via Figshare, as part of one integrated submission process.

https://cutt.ly/RMTKcpo

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"Elsevier and Council of Australian University Librarians Sign Agreement to Support Transition to Open Access Publishing Alongside Continued Research Access for Australia and New Zealand Researchers"


The three-year agreement addresses CAUL’s goals for a rapid and sustainable transition to open access publishing and represents the largest transformative agreement for both countries.

Under the agreement, which takes effect from January 2023, ANZ researchers at CAUL-affiliated academic institutions that participate in the agreement can make their research articles immediately available via open access publishing in Elsevier’s journals.

https://cutt.ly/BMQRgeL

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"Research Data Management Needs Assessment of Clemson University"


The faculty, staff, and graduate students at Clemson University were surveyed by the library about their RDM needs in the spring of 2021. The survey was based on previous surveys from 2012 and 2016 to allow for comparison, but language was updated, and additional questions were added because the field of RDM has evolved. Survey findings indicated that researchers are overall more likely to back up and share their data, but the process of cleaning and preparing the data for sharing was an obstacle. Few researchers reported including metadata when sharing or consulting the library for help with writing a Data Management Plan (DMP). Researchers want RDM resources; offering and effectively marketing those resources will enable libraries to both support researchers and encourage best practices. Understanding researcher needs and offering time-saving services and convenient training options makes following RDM best practices easier for researchers. Outreach and integrated partnerships that support the research life cycle are crucial next steps for ensuring effective data management.

https://doi.org/10.31274/jlsc.13970

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"How Often Do Cancer Researchers Make Their Data and Code Available and What Factors Are Associated with Sharing"


One in five studies declared data were publicly available (59/306, 19%, 95% CI: 15–24%). However, when data availability was investigated this percentage dropped to 16% (49/306, 95% CI: 12–20%), and then to less than 1% (1/306, 95% CI: 0–2%) when data were checked for compliance with key FAIR principles. While only 4% of articles that used inferential statistics reported code to be available (10/274, 95% CI: 2–6%), the odds of reporting code to be available were 5.6 times higher for researchers who shared data.

https://doi.org/10.1186/s12916-022-02644-2

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

Paywall: "Expanding Your Institutional Repository: Librarians Working with Faculty"


Since a successful institutional repository will contain a higher percentage of the contributors’ materials, we implemented a system to upload faculty publications more effectively to our academic library’s institutional repository.. . . The success of this method is indicated by the increase in articles that have been uploaded to our institutional repository; as a result of the implementation of this program, the number of publications in our university’s institutional repository by these authors has increased 174 %.

https://doi.org/10.1016/j.acalib.2022.102628

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

Data Primer: Making Digital Humanities Research Data Public


This Data Primer was collaboratively authored by over 30 Digital Humanities researchers and research assistants, and was peer-reviewed by data professionals. It serves as an overview of the different aspects of data curation and management best practices for digital humanities researchers. Endorsed by the National Training Expert Group of the Digital Research Alliance of Canada.

https://cutt.ly/8MhHFnO

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"The Rise of Open Access Journals in Radiation Oncology: Influence on Resident Research, 2015 – 2019"


The residents in this study published 2,637 first-author, PubMed-searchable manuscripts, 555 (21.0%) of which appeared in 138 OA journals. The number of publications in OA journals per resident increased from 0.47 for the class of 2015 to 0.79 for the class of 2019. Publications in OA journals garnered fewer citations than those in non-OA journals (8.9 versus 14.9, p < 0.01). 90.6% of OA journals levy an APC for original research reports (median $1,896), which is positively correlated with their 2019 impact factor (r = 0.63, p < 0.01). Aggregate APCs totaled $900,319.21 and appeared to increase over the study period.

https://doi.org/10.1016/j.adro.2022.101121

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |

"MIT Press Direct to Open Books Downloaded More than 176,312 Times in Ten Months"


In 2021, the MIT Press launched Direct to Open (D2O), a bold, innovative model for open access (OA) to scholarship and knowledge. To date, about 50 of the 80 scholarly monographs and edited collections in the Direct to Open model in 2022 have been published and these works have been downloaded over 176,000 times. . . . The MIT Press has also seen an increase in the readership of scholarly monographs and edited collections. While a typical printed scholarly monograph might sell only a few hundred copies total, chapters from the open access version of these titles have already been downloaded up to 25,000 times.

https://cutt.ly/oMyMCNi

| Research Data Publication and Citation Bibliography | Research Data Sharing and Reuse Bibliography | Research Data Curation and Management Bibliography | Digital Scholarship |